Gallery of LISA benchmark datasets

cell_type geo_id hs_gene_symbol organism pert_type gene_set_type Combined
2102Ep human embryonal carcinoma cell line SOX2 human KO down & up
NTera-2 human embryonal carcinoma cell line SOX2 human KO down & up
AZ-521 gastric cancer (GC) cell line - 18 Hours SOX2 human KD down & up
AZ-521 gastric cancer (GC) cell line - 24 Hours SOX2 human KD down & up
MCF10A HER2 MYC human OE down & up
Pfeiffer DLBCL BCL6 human KD down & up
OCI-Ly7 DLBCL BCL6 human KD down & up
A549 NFE2L2 human KD down & up
A549 NFE2L2 human KD down & up
MCF7 ESR1 human KD down & up
MDA-MB-231 TP53 human KD down & up
medulloblastoma MYC human OE down & up
medulloblastoma MYC human OE down & up
medulloblastoma MYC human OE down & up
medulloblastoma MYC human OE down & up
medulloblastoma MYC human KD down & up
MCF7 ESR1 human OE down & up
MCF7 ESR1 human KD down & up
Dendritic cells (DCs) RARA human OE down & up
Dendritic cells (DCs) PPARG human OE down & up
Hela MYC human KD down & up
MCF7 MYC human KD down & up
MCF7 ESR1 human OE down & up
MCF7 ESR1 human OE down & up
MCF7 ESR1 human OE down & up
MCF7 ESR1 human OE down & up
MCF7 MYC human OE down & up
MOLT4 NOTCH1 human OE down & up
KATOIII(gastric cancer) GATA4 human KD down & up
YCC3(gastric cancer) GATA4 human KD down & up
AGS(gastric cancer) GATA4 human KD down & up
AGS(gastric cancer) GATA6 human KD down & up
KATOIII(gastric cancer) GATA6 human KD down & up
YCC3(gastric cancer) GATA6 human KD down & up
YCC3(gastric cancer) KLF5 human KD down & up
KATOIII(gastric cancer) KLF5 human KD down & up
AGS(gastric cancer) KLF5 human KD down & up
LNCaP AR human OE down & up
MCF7 ESR1 human OE down & up
CUTLL1 NOTCH1 human OE down & up
A549 NR3C1 human OE down & up
embryonic stem cells POU5F1 human KD down & up
embryonic stem cells POU5F1 human KD down & up
HEK293 REST human KD down & up
HEK293 REST human KD down & up
peripheral blood EZH2 human KD down & up
MV4-11 SMARCA4 human KD down & up
DU145 ETS1 human KD down & up
SPAC-1L STAT1 human KD down & up
SPAC-1L STAT1 human KD down & up
K562 ERG human OE down & up
MCF10A GABPA human KD down & up
PC9 GATA6 human KD down & up
MCF7 NR3C1 human OE down & up
MCF7 ESR1 human OE down & up
MCF7 RARA human OE down & up
MCF7 RARA RARG human OE down & up
MCF7 RARG human OE down & up
MCF7 STAT1 STAT2 STAT3 IRF9 human OE down & up
MCF7 SIN3A human KD down & up
nan BMI1 human KD down & up
CWR22Rv1 STAT3 human KD down & up
DU145 STAT3 human KD down & up
H1618 ASCL1 human KD down & up
H1618 ASCL1 human KD down & up
HCT116 SIN3A SIN3B human KD down & up